BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030A03LP1|AL429142
(814 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1766 1516 0.0
>3x_Contig1766
Length = 23951
Score = 1516 bits (759), Expect = 0.0
Identities = 792/809 (97%)
Strand = Plus / Minus
Query: 6 gatcaaaaggaaaggtgcttcgccaaaaaaaaaaaaaaaatggaaaattcaaacaataaa 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14263 gatcaaaaggaaaggtgcttcgccaaaaaaaaaaaaaaaatggaaaattcaaacaataaa 14204
Query: 66 aataaaacgtcttttttcgaaaaaatccgtctttttctttccagatcatcgtaacggaat 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14203 aataaaacgtcttttttcgaaaaaatccgtctttttctttccagatcatcgtaacggaat 14144
Query: 126 tgagatcgagaaagaatgttcatagaaacgatcgtgcgatcagtaagtttgggtgaagat 185
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 14143 tgagatcgagaaagaatgttcatagaaacgatcgtgcgatcagtaagtatgggtgaagat 14084
Query: 186 gatggtctcttcgagacctccgtctagaattcagattccacttggattggaatggattga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14083 gatggtctcttcgagacctccgtctagaattcagattccacttggattggaatggattga 14024
Query: 246 tggttatggttaccatgcwtttgagggacaaatgccgcgcctccaatctttaagtttatt 305
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct: 14023 tggttatggttaccatgcatttgagggacaaatgccgcgcctccaatctttaagtatatg 13964
Query: 306 awttgcctattctccggggtttgttaagttcaacttgcgtkttcttcgaagcccagttga 365
| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 13963 aattgcctattctccggggtttgttaagttcaacttgcgtgttcttcgaagcacagttga 13904
Query: 366 aattagatcttatattttctatctatgttcatgccttagcgtatgcgggtctaggtattc 425
||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 13903 aattagatcttatatattctatctatgtacatgcctaagcgtatgcgggtctaggtattc 13844
Query: 426 tcaaagcggatttggtttgagactagatatataahwhttccaamagatataccttgatgt 485
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 13843 tcaaagcggatttggtttgagactagatatataaaaattccaaaagatataccttgatgt 13784
Query: 486 agaaagcttgcggagtagttagagaactgaaggataatgagaagatacgtgttttagttg 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13783 agaaagcttgcggagtagttagagaactgaaggataatgagaagatacgtgttttagttg 13724
Query: 546 aggggggttgctaaattgtctaaacactgctatcgccgaagataccccaatattgctcaa 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13723 aggggggttgctaaattgtctaaacactgctatcgccgaagataccccaatattgctcaa 13664
Query: 606 caccttgagcaccggcatccttccagtagtcgttgtatgtggtgaataagatggcttggg 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13663 caccttgagcaccggcatccttccagtagtcgttgtatgtggtgaataagatggcttggg 13604
Query: 666 aacctagagtgtcgatgatggattggacacaggtttcttggtttgatttggatggaacac 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13603 aacctagagtgtcgatgatggattggacacaggtttcttggtttgatttggatggaacac 13544
Query: 726 aacttccgtaagtktcaccctttgttggccagccagtttcagttacgatgattttcttgc 785
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 13543 aacttccgtaagtgtcaccctttgttggccagccagtttcagtgacgatgattttcttgc 13484
Query: 786 cgttgttacacgtagaagamaagttgtcc 814
||||||||||||||||||| |||||||||
Sbjct: 13483 cgttgttacacgtagaagacaagttgtcc 13455
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,153
Number of Sequences: 1807
Number of extensions: 16153
Number of successful extensions: 2552
Number of sequences better than 1.0e-20: 1
length of query: 814
length of database: 10,358,551
effective HSP length: 16
effective length of query: 798
effective length of database: 10,329,639
effective search space: 8243051922
effective search space used: 8243051922
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.3 bits)